BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032G02SP1|AL429617
(406 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1560 457 e-128
3x_Contig1800 384 e-107
>3x_Contig1560
Length = 9209
Score = 457 bits (227), Expect = e-128
Identities = 287/302 (95%), Gaps = 8/302 (2%)
Strand = Plus / Plus
Query: 86 gacaacaagamgtaaaacatagtatattaaaaggmtggggaatacttgagtgtaaatcmt 145
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 2744 gacaacaagaagtaaaacatagtatattaaaaggatggggaatacttgagtgtaaatcat 2803
Query: 146 atcaaaataaamatgaagcaactacgcagcaaatttgtwaaagagtacctcaatgtgcta 205
||||||||||| |||||| ||||| || |||||||| |||||||||||||||||||||
Sbjct: 2804 atcaaaataaaaatgaag-aactag--ag-aaatttgtaaaagagtacctcaatgtgcta 2859
Query: 206 gtaccattgtggatcatwacaatccgtgaactctcactctccgagtgtcggttaaagata 265
||||||||||||||||| |||||||||||||| ||||||||| ||||| |||||||||||
Sbjct: 2860 gtaccattgtggatcataacaatccgtgaact-tcactctcc-agtgt-ggttaaagata 2916
Query: 266 gtcgattccctctgtgcagtccaatctcaagatccatcaatcatcaataactttgaccta 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2917 gtcgattccctctgtgcagtccaatctcaagatccatcaatcatcaataactttgaccta 2976
Query: 326 gaagggtttgtgtttgtgatgttcggagacgatactgccttgattatatatttattatat 385
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2977 gaagggtttgtgtttgtgatgttcggaga-gatactgccttgattatatatttattatat 3035
Query: 386 tt 387
||
Sbjct: 3036 tt 3037
>3x_Contig1800
Length = 38778
Score = 384 bits (191), Expect = e-107
Identities = 221/227 (97%), Gaps = 4/227 (1%)
Strand = Plus / Plus
Query: 176 aaatttgtwaaagagtacctcaatgtgctagtaccattgtggatcatwacaatccgtgaa 235
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 37722 aaatttgtaaaagagtacctcaatgtgctagtaccattgtggatcataacaatccgtgaa 37781
Query: 236 ctctcactctccgagtgtcggttaaagatagtcgattccctctgtgcagtccaatctcaa 295
|| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 37782 ct-tcactctcc-agtgt-ggttaaagatagtcgattccctctgtgcagtccaatctcaa 37838
Query: 296 gatccatcaatcatcaataactttgacctagaagggtttgtgtttgtgatgttcggagac 355
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37839 gatccatcaatcatcaataactttgacctagaagggtttgtgtttgtgatgttcggaga- 37897
Query: 356 gatactgccttgattatatatttattatattttatttattatatttt 402
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37898 gatactgccttgattatatatttattatattttatttattatatttt 37944
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.714 1.32
Gapped
Lambda K H
1.39 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2868
Number of Sequences: 1807
Number of extensions: 2868
Number of successful extensions: 119
Number of sequences better than 1.0e-20: 2
length of query: 406
length of database: 10,358,551
effective HSP length: 15
effective length of query: 391
effective length of database: 10,331,446
effective search space: 4039595386
effective search space used: 4039595386
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 49 (99.1 bits)